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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809663.1_cds_XP_016495870.1_10148
CDS Infomation

[gene=LOC107814882] [db_xref=GeneID:107814882] [protein=putative respiratory burst oxidase homolog protein H isoform X2] [protein_id=XP_016495870.1] [location=join(97009..97113,97190..97996,98241..98333,98437..98552,98636..98738,98998..99089,99170..99317,99399..99530,99629..99757,99845..99923,100218..100327)] [gbkey=CDS]
Sequence

ATGAGTGCTGCAGCCAACAAATTGACAAACTTCAAGCAACATGCACCAACATATGCAGCT
TTAATTATGGAAGAGTTTGATCCTGACCATTTAGGATATATTGAGATATGGCAACTTGAA
TCTCTACTAAGAGGAATGGTAGGATCAGAAGATGGGAAAAAGAACTTGAAGAGATCACAA
ACACTAGCAAAAACCATGATCCCCAGACAATATAGAACTCCAGTGAGCAAATTCTTGACG
AAAACCTTAGAAAAGATACACGATAATTGGAAAAGAATTTGGGTCGTAACATTGTGGTTG
TCTATTAACCTGATATTATTCATATGGAAAGTTCAACAATTTAAGGGGAGAGCAGCTTTC
AAGATTATGGGTTATTGTGTTTGTATAGCTAAAGCTGCAGGTGAAACTCTCAAGTTTAAT
ATGGCTCTCATTCTCTTACCAGTATGCAGAAGAACTCTTACTCAACTCAGAGAAACTTTT
CTTGGTTCTATTATACCCTTTGATGATAACATCAATTTCCATAAAATGATTTCCTTGGGA
ATTACTCTAGGGACTTTTATTCATGTCTTGTTTCACACGAGTTGCAACTTTGTAAAATTA
GTATCCTGCCCGAAAAGCAAATTTATGACGGTTCTTGGAAGCAATTTTGACTACCACCAA
CCGACTTACATGGATTTGGTAGCATCTATTCCAGGCGTAACGGGGATACTAATGACCCTT
CTCATGCTTTTCTCCTTCACACTGGCAACACATTCGTTCCGAAGGAATGTCATCAAGTTG
CCATGGCCATTTCATCATTTAGCAGGATTTAACGCGTTCTGGTATGCACATCATCTGTTG
GTACTCGTTTACGTGCTCTTGATCCTACATGGTTACTTCATATTCCTCACCAAAGAATGG
TACAAAAAGACGACATGGATGTATCTTGCAGTCCCAGTACTTCTATATGCTACAGAAAGA
GTTCTTATCGTCAATGAGAACCGCTACCATGTGAACATCCAAAAGGCTGTTACGTATACA
GGAAATGTACTAGCACTGTATATGAGTAAACCTCAAGGATTCAAGTACAAGAGCGGGATG
TACTTGTTTGTTAAATGTCCAGATATATCAAACTTCGAATGGCATCCGTTCTCAATCACT
TCTGCACCAGACGATAACTATTTAAGTGTCCATATACGTACATTAGGAGACTGGACTACA
GAGCTTAGAACCAGATTTCAAAAGGCTTGTCAAGCAACACAATCAAGGACGAAAAATCTT
ATTAGAATGGAAACTAAAGCATATAATCCACATGATGCCGAACAATCTCAAGACGAATTT
CCAAGGATCATTATCAAAGGGCCTTACGGTGCACCAGCTCAGAACTACAAGAAATATGAT
ATCCTTCTGCTAGTTGGCTTAGGAATTGGAGCAACACCCTTTATCAGCATTATAAAAGAC
ATACTAAACCAAGAATCGGGACATAGTCAGAAGGATGATGAATTATCTAGCAAGAAAGGT
CCTCAAAGAGCATATTTCTACTGGGTGACACGAGAACAAGGATCATTCGACTGGTTTAAG
GGTGTAATGGATGACATCGCTGAACATGACAAAAATGAAGTGATAGAAATGCACAACTAC
TTGACTAGTGTTTATGAAGAAGGAGATGCTAGATCAGCACTAATCGCTATGGTGCAGTCA
CTGCAACATGCTAAAAATGGAGTTGATGTTGTCTCAGAAAGCCGGATAAGAACACATTTC
GCTAGACCAAATTGGAGAAAGGTGTTCTCTCAATTGGCAGCAGCCCATCCATCATCTCGC
ATTGGTGTGTTCTACTGTGGAAGTCCAACACTTACCAAACCACTCAGAAAGCTGTGTCAA
GAATTTAGCTTAAATTCATCCACTCGCTTCAACTTCCATAAAGAGAACTTCTAG

Peptide Sequence

PEP ID

XP_016495870.1
PEP Infomation

PREDICTED: putative respiratory burst oxidase homolog protein H isoform X2 [Nicotiana tabacum]
Sequence

MSAAANKLTNFKQHAPTYAALIMEEFDPDHLGYIEIWQLESLLRGMVGSEDGKKNLKRSQ
TLAKTMIPRQYRTPVSKFLTKTLEKIHDNWKRIWVVTLWLSINLILFIWKVQQFKGRAAF
KIMGYCVCIAKAAGETLKFNMALILLPVCRRTLTQLRETFLGSIIPFDDNINFHKMISLG
ITLGTFIHVLFHTSCNFVKLVSCPKSKFMTVLGSNFDYHQPTYMDLVASIPGVTGILMTL
LMLFSFTLATHSFRRNVIKLPWPFHHLAGFNAFWYAHHLLVLVYVLLILHGYFIFLTKEW
YKKTTWMYLAVPVLLYATERVLIVNENRYHVNIQKAVTYTGNVLALYMSKPQGFKYKSGM
YLFVKCPDISNFEWHPFSITSAPDDNYLSVHIRTLGDWTTELRTRFQKACQATQSRTKNL
IRMETKAYNPHDAEQSQDEFPRIIIKGPYGAPAQNYKKYDILLLVGLGIGATPFISIIKD
ILNQESGHSQKDDELSSKKGPQRAYFYWVTREQGSFDWFKGVMDDIAEHDKNEVIEMHNY
LTSVYEEGDARSALIAMVQSLQHAKNGVDVVSESRIRTHFARPNWRKVFSQLAAAHPSSR
IGVFYCGSPTLTKPLRKLCQEFSLNSSTRFNFHKENF

Transcript Sequence

Gene sequence data has not been registered.